SeedNet Online - Gene Co-expression Network Visualization
This online resource provides a queryable interface for SeedNet, a genome-wide network model describing transcriptional interactions in dormant and germinating Arabidopsis seeds. Users can zoom into the network, search and highlight genes of interest and download images of the network representation.
SeedNet_network

Click here to load SeedNet


Important: Full support is provided for Firefox >= 3.6 browser [Download]
This is a very large (genome-wide) network. This enhanced tool capable of displaying this large amount of data is currently limited to this browser.

Publication:
George W. Bassel, Hui Lan, Enrico Glaab, Daniel J. Gibbs, Tanja Gerjets, Natalio Krasnogor, Anthony J. Bonner, Michael J. Holdsworth, Nicholas J. Provart
A genome-wide network model capturing seed germination reveals coordinated regulation of plant cellular phase transitions
Proceedings of the National Academy of Sciences of the United States of America (2011), 10.1073/pnas.1100958108 (see online)


Please note:
If you have problems to display the visualization, please check the recommended operating systems and supported web-browsers

SeedNet is associated with
the ERANET-PG vSEED project, the Centre for Plant Integrative Biology and Infobiotics (University of Nottingham) and The Bio-Array Resource for Plant Functional Genomics (University of Toronto)
Seednet_LogoSeednet_Logo Infobiotics_Logo eFP Browser


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